Getting nokogiri to install was failing for me. I'm using bundler and needed nokogiri. Gem is trying to compile it and failing on libxml2.

At first I tried using the libxml from brew, that that didn't work, so specified where to find XCode's version of libxml in my bundle config.

BUNDLE_BUILD__NOKOGIRI: "--use-system-libraries=true --with-xml2-include=/Applications/"

You might need to tweak the MacOSX10.14.sdk part, that's for Mojave, I've been using this line for a while, and just updated from 10.12->10.13->10.14.

I also like to install the gems in my home directory, so I add the following to my bundle config:
BUNDLE_PATH: "/Users/thomas/.gem"

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